User profiles for J. C. Gee
James GeeUniversity of Pennsylvania, University of Washington Verified email at upenn.edu Cited by 51159 |
[HTML][HTML] Anatomical structures, cell types and biomarkers of the Human Reference Atlas
The Human Reference Atlas (HRA) aims to map all of the cells of the human body to advance
biomedical research and clinical practice. This Perspective presents collaborative work by …
biomedical research and clinical practice. This Perspective presents collaborative work by …
User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability
…, J Piven, HC Hazlett, RG Smith, S Ho, JC Gee… - Neuroimage, 2006 - Elsevier
Active contour segmentation and its robust implementation using level set methods are well-established
theoretical approaches that have been studied thoroughly in the image analysis …
theoretical approaches that have been studied thoroughly in the image analysis …
N4ITK: improved N3 bias correction
… Egan, PA Yushkevich, and JC Gee are with the Department of Radiology, University of …
[9] NJ Tustison and JC Gee, “N-d Cb -spline scattered data approximation,” Insight J., pp. 1–…
[9] NJ Tustison and JC Gee, “N-d Cb -spline scattered data approximation,” Insight J., pp. 1–…
Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain
One of the most challenging problems in modern neuroimaging is detailed characterization
of neurodegeneration. Quantifying spatial and longitudinal atrophy patterns is an important …
of neurodegeneration. Quantifying spatial and longitudinal atrophy patterns is an important …
A reproducible evaluation of ANTs similarity metric performance in brain image registration
The United States National Institutes of Health (NIH) commit significant support to open-source
data and software resources in order to foment reproducibility in the biomedical imaging …
data and software resources in order to foment reproducibility in the biomedical imaging …
[HTML][HTML] Computational analysis in epilepsy neuroimaging: a survey of features and methods
Epilepsy affects 65 million people worldwide, a third of whom have seizures that are resistant
to anti-epileptic medications. Some of these patients may be amenable to surgical therapy …
to anti-epileptic medications. Some of these patients may be amenable to surgical therapy …
Spatial transformations of diffusion tensor magnetic resonance images
… Pierpaoli, PJ Basser, and JC Gee, “Techniques for spatial normalization of diffusion
tensor images,” in Proc. SPIE Medical Imaging, 2000, vol. 3979, KM Hanson, Ed., 2000, pp. …
tensor images,” in Proc. SPIE Medical Imaging, 2000, vol. 3979, KM Hanson, Ed., 2000, pp. …
The optimal template effect in hippocampus studies of diseased populations
We evaluate the impact of template choice on template-based segmentation of the hippocampus
in epilepsy. Four dataset-specific strategies are quantitatively contrasted: the “closest to …
in epilepsy. Four dataset-specific strategies are quantitatively contrasted: the “closest to …
Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements
Many studies of the human brain have explored the relationship between cortical thickness
and cognition, phenotype, or disease. Due to the subjectivity and time requirements in …
and cognition, phenotype, or disease. Due to the subjectivity and time requirements in …
[HTML][HTML] The Insight ToolKit image registration framework
Publicly available scientific resources help establish evaluation standards, provide a platform
for teaching and improve reproducibility. Version 4 of the Insight ToolKit (ITK 4 ) seeks to …
for teaching and improve reproducibility. Version 4 of the Insight ToolKit (ITK 4 ) seeks to …